nf-core / eager

A fully reproducible and state-of-the-art ancient DNA analysis pipeline
https://nf-co.re/eager
MIT License
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Update test configs #889

Closed TCLamnidis closed 2 years ago

TCLamnidis commented 2 years ago

Some parameters have been updated or had their names changed with new releases of the pipeline, but test config files have not necessarily been kept up to date with the latest parameter names.

E.g. https://github.com/nf-core/eager/blob/43a239bd132b4a6ccf791d7052f537f3d22b700c/conf/benchmarking_human.config#L26-L28 Where the bam trimming parameters have different names since release 2.4.1

these should be updated to be usable with the latest releases.