DSL2: Add test profile that forces ALL the possible merging steps for FastQ and BAM inputs, to ensure no file name collisions happen. - Githubissues

nf-core / eager

A fully reproducible and state-of-the-art ancient DNA analysis pipeline

https://nf-co.re/eager

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DSL2: Add test profile that forces ALL the possible merging steps for FastQ and BAM inputs, to ensure no file name collisions happen. #986

Open TCLamnidis opened 1 year ago

TCLamnidis commented 1 year ago

Merges happen at these levels:

pairness (BAMs are always SE, so that should be fine.)
lane
udg
library_id