nf-core / eager

A fully reproducible and state-of-the-art ancient DNA analysis pipeline
https://nf-co.re/eager
MIT License
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DSL2: Add popgen input files to reference sheet #988

Closed scarlhoff closed 11 months ago

scarlhoff commented 1 year ago

Need to add input files for popgen analyses to the reference input sheet

- [x] HapMap file for ANGSD contamination estimation
- [x] SNP capture beds
- [x] eigenstrat snp files for pileupcaller
- [x] masked fasta for PMD tools