DSL2: BAM to FastQ conversion. Ensure that lane info is kept.

nf-core / eager

A fully reproducible and state-of-the-art ancient DNA analysis pipeline

https://nf-co.re/eager

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DSL2: BAM to FastQ conversion. Ensure that lane info is kept. #999

Closed TCLamnidis closed 3 months ago

TCLamnidis commented 1 year ago

When bam input conversion to fastQ is added for remapping, ensure that lane information is kept in the output file names to avoid file name collisions

scarlhoff commented 3 months ago

Addressed in #987 and #1060