search

nf-core / exoseq

Please consider using/contributing to https://github.com/nf-core/sarek
http://nf-co.re
MIT License
16 stars 28 forks source link

Trimgalore fuse fastqc #33

Closed apeltzer closed 6 years ago

apeltzer commented 6 years ago

Fixing https://github.com/nf-core/exoseq/issues/15

apeltzer commented 6 years ago

Until there is the possibility to group samples in MultiQC (which is an open dev branch here https://github.com/ewels/MultiQC/tree/group_samples ) , we'll do the following:

a.) Run FastQC on raw data b. ) Run integrated FastQC after applying trim-galore