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nf-core / genomeqc

Compare the quality of multiple genomes, along with their annotations.
https://nf-co.re/genomeqc
MIT License
3 stars 10 forks source link

Plot for the phylogenetic tree plus stats (e.g. BUSCO) #16

Closed chriswyatt1 closed 1 month ago

chriswyatt1 commented 1 month ago

The idea here is to make a phylogenetic tree from the output of "orthofinder" (currently, but tree software could change), then add the statistics about each genome to the right (BUSCO, chromosome numbers, etc).

chriswyatt1 commented 1 month ago

Done in https://github.com/Eco-Flow/genomeqc/pull/47

But could be a lot better. So will keep this issue open