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nf-core / genomeqc

Compare the quality of multiple genomes, along with their annotations.
https://nf-co.re/genomeqc
MIT License
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Validate input samplesheet #8

Open FernandoDuarteF opened 3 weeks ago

FernandoDuarteF commented 3 weeks ago

We need to think a way to validate the input sample sheet using validateInputSamplesheet(). There is an RNAseq input sample sheet validation as example in subworkflows/local/utils_nfcore_genomeqc_pipeline/main.nf.

FernandoDuarteF commented 3 weeks ago

I think it would be nice to do this before adding other modules.

FernandoDuarteF commented 3 weeks ago

Or perhaps there is nothing to validate that input_schema.json doesn't take care of already.

FernandoDuarteF commented 2 weeks ago

Added a validation method for the sample sheet in 492503f, at least temporary.