search

nf-core / gwas

UNDER CONSTRUCTION: A pipeline for Genome Wide Association Studies
https://nf-co.re/gwas
MIT License
22 stars 17 forks source link

Dataset for GWAS development #24

Open abhi18av opened 2 years ago

abhi18av commented 2 years ago

We need to find a good dataset for testing the implementation of the pipeline.

This issue stems from a discussion documented here https://github.com/nf-core/gwas/issues/16#issuecomment-1030649162

abhi18av commented 2 years ago

We're now looking for GWAS ancestry oriented datasets to being development time testing.

abhi18av commented 2 years ago

A sample datasets for testing later

abhi18av commented 2 years ago

A sample dataset generated for initial testing by JT https://github.com/jeantristanb/h3agwasnfcore_kgp_example

Related #29

jeantristanb commented 2 years ago

Or h3agwas example can be used : https://github.com/h3abionet/h3agwas-examples