Important! Template update for nf-core/tools v2.3

[nf-core-bot]

Version 2.3 of nf-core/tools has just been released with updates to the nf-core template. This automated pull-request attempts to apply the relevant updates to this pipeline.

Please make sure to merge this pull-request as soon as possible, resolving any merge conflicts in the nf-core-template-merge-2.3 branch (or your own fork, if you prefer). Once complete, make a new minor release of your pipeline.

For instructions on how to merge this PR, please see https://nf-co.re/developers/sync.

For more information about this release of nf-core/tools, please see the v2.3 release page.

[github-actions[bot]]

YAML linting is failing

To keep the code consistent with lots of contributors, we run automated code consistency checks. To fix this CI test, please run:

• Install yamllint
  • Install yamllint following this instructions or alternative install it in your conda environment
• Fix the markdown errors
  • Run the test locally: yamllint $(find . -type f -name "*.yml" -o -name "*.yaml") -c ./.yamllint.yml
  • Fix any reported errors in your YAML files

Once you push these changes the test should pass, and you can hide this comment :+1:

We highly recommend setting up yaml-lint in your code editor so that this formatting is done automatically on save. Ask about it on Slack for help!

Thanks again for your contribution!

[nf-core-bot]

Version 2.3.1 of the nf-core/tools pipeline template has just been released. This pull-request is now outdated and has been closed in favour of https://github.com/nf-core/hic/pull/122

Please use https://github.com/nf-core/hic/pull/122 to merge in the new changes from the nf-core template as soon as possible.