search

nf-core / hic

Analysis of Chromosome Conformation Capture data (Hi-C)
https://nf-co.re/hic
MIT License
90 stars 54 forks source link

Invalid pairs files generation for previous versions #151

Closed koushik20 closed 1 year ago

koushik20 commented 1 year ago

Are invalid pairs files generated from only version 2.0.0 with the --save_pairs_intermediates command and not for the previous versions such as 1.3.0 and 1.0.0 because I ran the pipeline with version 1.0.0 and the invalid pairs files are not generated and there is no --save_pairs_intermediates option in that version. Is there another workaround?

Thank you!

nservant commented 1 year ago

Hi, I think in previsou verson, we had a --save_nonvalid_pairs option. N