Cannot edit config files

nf-core / hic

Analysis of Chromosome Conformation Capture data (Hi-C)

https://nf-co.re/hic

MIT License

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Cannot edit config files #209

Open aperreault opened 4 weeks ago

aperreault commented 4 weeks ago

Hi there! I'm using nf-core/hic through a docker profile and need to edit the nextflow.config file to change the max resources my computer has available. Any advice on how to do so? I've tried creating a custom config file and running nf-core/hic with -c and -C commands, but neither overrides the pipeline defaults. Thanks!

nservant commented 3 weeks ago

Hi, That's weird. Usually, using -c is the right way to go. Could you show me your custom config please ?

aperreault commented 2 weeks ago

Below is the contents of the config file:

process { resourceLimits = [ cpus: 8, memory: 256.GB, time: 24.h ] }

I have it names resource.config