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nf-core
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isoseq
Genome annotation with PacBio Iso-Seq. Takes raw subreads as input, generate Full Length Non Chemiric (FLNC) sequences and produce a bed annotation.
https://nf-co.re/isoseq
MIT License
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13
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Important! Template update for nf-core/tools v3.0.2
#35
nf-core-bot
opened
4 weeks ago
0
Important! Template update for nf-core/tools v3.0.1
#34
nf-core-bot
closed
4 weeks ago
1
Important! Template update for nf-core/tools v3.0.0
#33
nf-core-bot
closed
1 month ago
1
nf-core/isoseq version 2
#32
sguizard
closed
2 months ago
2
test
#31
mirpedrol
closed
2 months ago
0
Important! Template update for nf-core/tools v2.14.1
#30
nf-core-bot
closed
5 months ago
0
Important! Template update for nf-core/tools v2.14.0
#29
nf-core-bot
closed
6 months ago
1
fixed the broken isoseq3 container by updating the its version.
#28
gawxyz
closed
2 months ago
2
Error using test profile
#27
youpze
closed
2 months ago
3
Important! Template update for nf-core/tools v2.13.1
#26
nf-core-bot
closed
6 months ago
1
URGENT: pin nf-validation version
#25
nvnieuwk
closed
2 months ago
2
Important! Template update for nf-core/tools v2.13
#24
nf-core-bot
closed
8 months ago
1
Important! Template update for nf-core/tools v2.12
#23
nf-core-bot
closed
8 months ago
1
fastq2bam convert
#22
Kratos12138
opened
10 months ago
0
Important! Template update for nf-core/tools v2.11
#21
nf-core-bot
closed
9 months ago
1
Important! Template update for nf-core/tools v2.10
#20
nf-core-bot
closed
10 months ago
1
nf-core/isoseq pipeline release: v1.1.5
#19
sguizard
closed
1 year ago
2
Transcript annotation with gene names
#18
astulaaa
opened
1 year ago
0
Important! Template update for nf-core/tools v2.9
#17
nf-core-bot
closed
1 year ago
0
Conversion from subreads.fastq.gz to subreads.bam
#16
LEESojung1998
opened
1 year ago
3
Important! Template update for nf-core/tools v2.8
#15
nf-core-bot
closed
1 year ago
2
Release 1.1.4
#14
sguizard
closed
1 year ago
2
Release 1.1.3 - Blue Grouse
#13
sguizard
closed
1 year ago
2
Important! Template update for nf-core/tools v2.7.2
#12
nf-core-bot
closed
1 year ago
0
Important! Template update for nf-core/tools v2.7.1
#11
nf-core-bot
closed
1 year ago
1
Enter the pipeline at step 3 (detect and remove chimeric reads)
#10
reginabohnert
closed
2 months ago
6
Update nf-core/isoseq to version 1.1.2
#9
sguizard
closed
1 year ago
2
Important! Template update for nf-core/tools v2.6
#8
nf-core-bot
closed
1 year ago
1
v1.1.1: Update pipeline to nfcore 2.5.1
#7
sguizard
closed
2 years ago
4
Important! Template update for nf-core/tools v2.5.1
#6
nf-core-bot
closed
2 years ago
1
Important! Template update for nf-core/tools v2.5
#5
nf-core-bot
closed
2 years ago
2
Release v1.0.0 -> v1.1.0
#4
sguizard
closed
2 years ago
2
Release 1.0.0
#3
sguizard
closed
2 years ago
2
PSEUDO PR - DO NOT MERGE
#2
ewels
closed
2 years ago
10
Minor updates on comments
#1
sguizard
closed
2 years ago
1