Add fastqc, khtools, move all installation into environment.yml - Githubissues

nf-core / kmermaid

k-mer similarity analysis pipeline

https://nf-co.re/kmermaid

MIT License

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Add fastqc, khtools, move all installation into environment.yml #15

Closed olgabot closed 5 years ago

olgabot commented 5 years ago

To enable the -profile conda profile, this PR moves all installation into environment.yml and adds fastqc and khtools to the requirements

PR checklist

[x] This comment contains a description of changes (with reason)
[ ] Ensure the test suite passes (nextflow run . -profile test,docker).
[ ] Make sure your code lints (nf-core lint .).
[x] CHANGELOG.md is updated
[ ] README.md is updated

Learn more about contributing: https://github.com/nf-core/kmer-similarity/tree/master/.github/CONTRIBUTING.md