process GTDBTK_CLASSIFYWF: glob in find command

nf-core / mag

Assembly and binning of metagenomes

https://nf-co.re/mag

MIT License

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process GTDBTK_CLASSIFYWF: glob in find command #547

Closed muniheart closed 5 months ago

muniheart commented 7 months ago

Description of the bug

[Tag 2.5.1] File modules/nf-core/gtdbtk/classifywf/main.nf, line 64: The argument to option -name contains glob character '*'. Either '*' should be escaped or the argument should be quoted.

Command used and terminal output

No response

Relevant files

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System information

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jfy133 commented 7 months ago

Just to keep track: this maybe fixed in an upcoming PR

jfy133 commented 6 months ago

OK is not fixed in an upcoming PR unfortuantely... @muniheart would you be willing to open a PR to fix this? Would likely be faster that way :)

jfy133 commented 5 months ago

Fixed in https://github.com/nf-core/mag/pull/548/commits/629e6672fa7d143945760008622fef3c7c10d0f9

jfy133 commented 5 months ago

and thanks @muniheart !