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nf-core / mag

Assembly and binning of metagenomes
https://nf-co.re/mag
MIT License
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Please make --binning_map_mode group and --ancient-dna compatible features #572

Closed winklerin closed 1 month ago

winklerin commented 5 months ago

Description of feature

Dear nf-core/mag team, I'm working on aDNA sequences and would like to coassemble them while having the functions for ancient DNA assembly activated. I get the following error: Invalid combination of parameter '--binning_map_mode' and parameter '--ancient_dna'. Ancient DNA mode can only be executed with --binning_map_mode own. You supplied: --binning_map_mode group
Might be a rare case, but for my samples it makes sense to coassemble. Could you please make --binning_map_mode group and --ancient-dna compatible features?

jfy133 commented 5 months ago

Hi @winklerin I assign this to Maxime as he has the most knowledge of the aDNA workflow :)

jfy133 commented 1 month ago

Done in PRs aboev