Fixing bug in bin/download_proteins_entrez.py: dict_proteinId_assemblyIds was buggy since the referenced assemblyIds was unintentionally changed by .append() (causing wrong and not reproducible results in entrez_data/entities_proteins.entrez.tsv). Fixed this by initialising dict_proteinId_assemblyIds with empty sets.
Fixing bug in
bin/download_proteins_entrez.py
:dict_proteinId_assemblyIds
was buggy since the referencedassemblyIds
was unintentionally changed by.append()
(causing wrong and not reproducible results inentrez_data/entities_proteins.entrez.tsv
). Fixed this by initialisingdict_proteinId_assemblyIds
with empty sets.This addresses the issue mentioned by @AntoniaSchuster in https://github.com/qbic-pipelines/metapep/issues/17.
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