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nf-core / metatdenovo

Assembly and annotation of metatranscriptomic or metagenomic data for prokaryotic, eukaryotic and viruses.
https://nf-co.re/metatdenovo
MIT License
22 stars 10 forks source link

Spades can be called in different flavors #271

Closed danilodileo closed 6 months ago

danilodileo commented 7 months ago

Description of feature

We need to add a parameter to change the flavor of Spades. there are several alternatives for rna and viruses. We should make them available.

danilodileo commented 6 months ago

Solved with #272