AS-XS tag missing - Githubissues

nf-core / methylseq

Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark or bwa-meth + MethylDackel

https://nf-co.re/methylseq

MIT License

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AS-XS tag missing #397

Open AndreiWCansor opened 4 months ago

AndreiWCansor commented 4 months ago

Description of feature

Dear nf-core team

We tried methylseq which's been brilliant. One specific question is about AS-XS tag as they were missing in our output bam file. I am wondering if it is possible to include them? For genomic analysis, we primarily rely these tags to spot problematic mappings.

Best