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nf-core / mhcquant

Identify and quantify MHC eluted peptides from mass spectrometry raw data
https://nf-co.re/mhcquant
MIT License
32 stars 25 forks source link

Alter tsv outcome #291

Open marissaDubbelaar opened 11 months ago

marissaDubbelaar commented 11 months ago

Description of feature

Make sure that the outcome TSV is changed to a more readable format since this content is not ready to be used for analysis immediately. A suggestion is that the current TSV be stored under intermediate results.

jonasscheid commented 3 weeks ago

We could use csvtk or csvkit suite to truncate the output. We definitely need to handle the quant TSV files differently before that