Closed sundysun99 closed 3 months ago
Looks like the test files are corrupt / did not get staged properly. I cannot reproduce your error on a local singularity instance, but since you use apptainer, can you try
$ nextflow run nf-core/mhcquant -r 2.5.0 -profile test,apptainer --outdir ./result_test
@sundysun99 Did you have the time to have a look again?
Closing this one @sundysun99. If you still have issues, feel free to reopen or join nf-core Slack to get in touch!
Description of the bug
Hi,
I got an error in the first step, 'profile test'. Here is the relevant report. Maybe there is something wrong with my singularity.
Command used and terminal output
Relevant files
No response
System information
nextflow version 23.10.1 Singularity version: apptainer version 1.2.5-1.el8