nf-core / modules

Repository to host tool-specific module files for the Nextflow DSL2 community!
https://nf-co.re/modules
MIT License
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Update main.nf #5870

Closed RaqManzano closed 3 months ago

RaqManzano commented 3 months ago

VEP html report is missing when publishing results because by default vep html file is _summary.html instead of .summary.html. This changes just adjust the module to the vep defaults to avoid the issue.

maxulysse commented 3 months ago

Actually, since one can choose the output name, why not just keep the html extension?

RaqManzano commented 3 months ago

Actually, since one can choose the output name, why not just keep the html extension?

I have done that now, if you don't mind, could you take a quick look? If all test pass, shall we merge?