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nf-core / modules

Repository to host tool-specific module files for the Nextflow DSL2 community!
https://nf-co.re/modules
MIT License
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[FEATURE] Port pytest with `--migrate-pytest-hard` #6226

Open GallVp opened 4 weeks ago

GallVp commented 4 weeks ago

Is your feature request related to a problem? Please describe

Use nf-core -v modules create --migrate-pytest --migrate-pytest-hard <tool/subtool> to migrate to nf-test.

I am experimenting with this command variant to automate pytest migration as much as possible. See fork: https://github.com/GallVp/nf-core-tools/tree/migpyt

Describe the solution you'd like

No response

Describe alternatives you've considered

No response

Additional context

No response

mashehu commented 3 weeks ago

Interesting! Could you open a PR against dev to see the changes you made?

GallVp commented 3 weeks ago

Interesting! Could you open a PR against dev to see the changes you made?

Thank you @mashehu

I have created a draft PR: https://github.com/nf-core/tools/pull/3138