nf-core / modules

Repository to host tool-specific module files for the Nextflow DSL2 community!
https://nf-co.re/modules
MIT License
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Improve module specific resource requests #6629

Open edmundmiller opened 2 months ago

edmundmiller commented 2 months ago

Meta issue from #6628 for more discussion and dropping some resources.

We might need to do some benchmarking of the biggest bottleneck modules.

edmundmiller commented 2 months ago
edmundmiller commented 2 months ago

Resource limits will probably help for example bismark align

SPPearce commented 1 week ago

Hmmm, I implemented the samtools sort memory setting in my in-house pipeline last week...