search

nf-core / modules

Repository to host tool-specific module files for the Nextflow DSL2 community!
https://nf-co.re/modules
MIT License
280 stars 715 forks source link

RTGtools missing in modules happy/happy #6637

Open melferink opened 1 month ago

melferink commented 1 month ago

Have you checked the docs?

Description of the bug

To use the vcfeval engine in hap.py executable of RTG(tools) is needed within the container. RTG seems to be absent in current images.

Command used and terminal output

No response

Relevant files

No response

System information

No response

kubranarci commented 1 week ago

If there is a plan to update container, I think this issue should be considered: https://github.com/Illumina/hap.py/issues/188

Now we have the same issue for the module.