Replace clahe parameter to skip_clahe so that the default is set to False, not True

nf-core / molkart

A pipeline for processing Molecular Cartography data from Resolve Bioscience (combinatorial FISH)

https://nf-co.re/molkart

MIT License

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Replace clahe parameter to skip_clahe so that the default is set to False, not True #13

Closed kbestak closed 1 year ago

kbestak commented 1 year ago

Description of feature

Contrast limited histogram adaptive histogram equalization is by default run. Currently it is implemented so that the clahe param is by default set to True. I want to replace it with a skip_clahe param which is by default set to False as it is better practice that default values are False.

kbestak commented 1 year ago

https://github.com/nf-core/molkart/pull/14 implements this