Closed FloWuenne closed 1 year ago
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nf-core lint
overall result: Passed :white_check_mark: :warning:Posted for pipeline commit 91d31bd
+| ✅ 158 tests passed |+
!| ❗ 21 tests had warnings |!
@kbestak : Currently still contains commented out portions for PROJECT_SPOTS and MCQUANT!
LGTM! Closes #11
PR checklist
The main feature of this PR is to replace the PROJECT_SPOTS and MCQUANT modules with a new module (SPOTS2CELL, temporary name). The new module needs only a fraction of the time and RAM to process the same data.
Addresses #11
nf-core lint
).nextflow run . -profile test,docker --outdir <OUTDIR>
).docs/usage.md
is updated.docs/output.md
is updated.CHANGELOG.md
is updated.README.md
is updated (including new tool citations and authors/contributors).