I've added the tilesize parameter as input for the pipeline so that Mindagap and Mindagap_duplicatedinder can use it (mainly so that we can use smaller test data that still uses biologically and technically appropriate information).
PR checklist
[X] This comment contains a description of changes (with reason).
[X] Make sure your code lints (nf-core lint).
[ ] Ensure the test suite passes (nextflow run . -profile test,docker --outdir <OUTDIR>).
[ ] Usage Documentation in docs/usage.md is updated.
[ ] Output Documentation in docs/output.md is updated.
I've added the tilesize parameter as input for the pipeline so that Mindagap and Mindagap_duplicatedinder can use it (mainly so that we can use smaller test data that still uses biologically and technically appropriate information).
PR checklist
nf-core lint
).nextflow run . -profile test,docker --outdir <OUTDIR>
).docs/usage.md
is updated.docs/output.md
is updated.CHANGELOG.md
is updated.