Mesmer does not require stack

nf-core / molkart

A pipeline for processing Molecular Cartography data from Resolve Bioscience (combinatorial FISH)

https://nf-co.re/molkart

MIT License

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Mesmer does not require stack #22

Closed kbestak closed 11 months ago

kbestak commented 11 months ago

As is right now, only Cellpose and ilastik require the creation of a stack for segmentation, but currently the stack is created even if only Mesmer is run. This can be optimized.