Closed FloWuenne closed 11 months ago
nf-core lint
overall result: Passed :white_check_mark: :warning:Posted for pipeline commit e378652
+| ✅ 158 tests passed |+
!| ❗ 12 tests had warnings |!
I will close this PR and open a new one on top of the freshly merged test-data passing CI to make it easiest!
PR checklist
This fix adds
$HOME
mounting for DEEPCELL_MESMER when using singularity, which is required to have access to the MESMER models within the container.nf-core lint
).nextflow run . -profile test,docker --outdir <OUTDIR>
).docs/usage.md
is updated.docs/output.md
is updated.CHANGELOG.md
is updated.README.md
is updated (including new tool citations and authors/contributors).