"image preprocessing" leftover? - add other headers also
output description missing
samplesheet.csv example has a space
USAGE.md
separartor
make sure example samplesheet exists
make sure params work
make it clearer conda is not supported
explain that running mixed samples possible, but that segmentation is applied as if comparable samples are used, e.g ilastik cannot handle different images as the project file defines if it is 1 or 2 channel.
I'll write issues found in the Documentation here for reference when they are fixed:
Can we remove run with conda tag on first page?