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nf-core / molkart

A pipeline for processing Molecular Cartography data from Resolve Bioscience (combinatorial FISH)
https://nf-co.re/molkart
MIT License
10 stars 8 forks source link

Segmentation with Stardist #80

Open kbestak opened 2 months ago

kbestak commented 2 months ago

Description of feature

https://nf-co.re/modules/stardist/

kbestak commented 1 month ago

Add cell expansion parameter as an optional input for maskfilter - open a separate issue