nf-core / oncoanalyser

A comprehensive cancer DNA/RNA analysis and reporting pipeline
https://nf-co.re/oncoanalyser
MIT License
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Gene fusion detection #63

Closed bounlu closed 2 months ago

bounlu commented 2 months ago

Description of feature

Please add gene fusion events detection from DNA-Seq data.

scwatts commented 2 months ago

Hi @bounlu, gene fusion detection for DNA data is already available through LINX for both WGS and targeted sequencing inputs.

bounlu commented 2 months ago

I see, in that case it would be nice to add the keyword fusion somewhere in the documentation.

scwatts commented 2 months ago

Thanks for the feedback, I'll include some reference to fusion detection.