nf-core / pathogensurveillance

Surveillance of pathogens using population genomics and sequencing
https://nf-co.re/pathogensurveillance
MIT License
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BUSCO graphs for assembled genomes #77

Open grunwald opened 3 months ago

grunwald commented 3 months ago

Add BUSCO completeness to any assembled genomes.

logankblair commented 1 month ago

BUSCO generates its completeness plot from a companion script (scripts/generate_plot.py). Instead calling this particular script within a subworkflow, then moving images around, it may be simpler to generate a similar version within the main report R script.