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nf-core / phaseimpute

MIT License
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Run full scale test #38

Closed LouisLeNezet closed 2 months ago

LouisLeNezet commented 5 months ago

The full scale test should work. Which test should we run at full scale ? I think the most exhaustive would be a simulation, pre-processing of the panel, phasing of the later, imputation and validation.

LouisLeNezet commented 4 months ago

This should also run the phasing and the remove of unwanted individuals from reference panel.

atrigila commented 2 months ago

We can launch a new test after the changes from the PRs #102 and #103 have been merged.

atrigila commented 2 months ago

@maxulysse can we ask you to launch a megatest to evaluate outputs and performance? Thank you