nf-core / quantms

Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Isobaric and DIA-LFQ quantification.
https://nf-co.re/quantms
MIT License
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Real full size data sets for AWS full tests #39

Closed jpfeuffer closed 7 months ago

jpfeuffer commented 2 years ago

Description of feature

Right now, we are using our small test data. Which is kind of enough to show the capabilities but the results do not make much sense. Would be nice if you e.g. see reasonable proteins in the volcano plots of msstats or things like that. We can then write stuff in the documentation on how to interpret results etc