nf-core / quantms

Quantitative mass spectrometry workflow. Currently supports proteomics experiments with complex experimental designs for DDA-LFQ, DDA-Isobaric and DIA-LFQ quantification.
https://nf-co.re/quantms
MIT License
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Create database index first for search engines that support it #40

Closed jpfeuffer closed 7 months ago

jpfeuffer commented 2 years ago

Description of feature

E.g. for MSGF+ we can first create the index for the database and then pass it to every ID step. Might need some customization in the OpenMS adapters.