Closed ramprasadn closed 1 month ago
master
branch :x:base
to dev
Hi @ramprasadn,
It looks like this pull-request is has been made against the nf-core/raredisease master
branch.
The master
branch on nf-core repositories should always contain code from the latest release.
Because of this, PRs to master
are only allowed if they come from the nf-core/raredisease dev
branch.
You do not need to close this PR, you can change the target branch to dev
by clicking the "Edit" button at the top of this page.
Note that even after this, the test will continue to show as failing until you push a new commit.
Thanks again for your contribution!
nf-core lint
overall result: Passed :white_check_mark: :warning:Posted for pipeline commit e7f16d2
+| ✅ 183 tests passed |+
#| ❔ 7 tests were ignored |#
!| ❗ 1 tests had warnings |!
This works well for me (1) running the code with skip_me_calling enabled, and (2) get a "missing parameter" message if I don't enable skip_me_calling. The code looks good to me. Thanks for a nice and quick fix :)
Thanks for the review @fa2k!
PR checklist
Fixes https://github.com/nf-core/raredisease/issues/542
nf-core lint
).nextflow run . -profile test,docker --outdir <OUTDIR>
).nextflow run . -profile test_one_sample,docker --outdir <OUTDIR>
).nextflow run . -profile debug,test,docker --outdir <OUTDIR>
).docs/usage.md
is updated.docs/output.md
is updated.CHANGELOG.md
is updated.README.md
is updated (including new tool citations and authors/contributors).