Migrate local modules to nf-core/modules - Githubissues

nf-core / rnafusion

RNA-seq analysis pipeline for detection of gene-fusions

https://nf-co.re/rnafusion

MIT License

143 stars 94 forks source link

Migrate local modules to nf-core/modules #448

Closed rannick closed 5 months ago

rannick commented 11 months ago

Description of feature

[x] convert2bed
[x] fusioncatcher: keep local, test won't work
[x] fusioninspector: keep local, test won't work
[x] fusionreport: keep local, specific to rnafusion
[x] hgnc download: keep local
[x] picard collectrnametrics
[x] rrnatranscripts
[x] starfusion: keep local, test won't work
[x] uscs/custom_gtftogenepred

rannick commented 5 months ago

Finished