search

nf-core / rnaseq

RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
https://nf-co.re/rnaseq
MIT License
923 stars 708 forks source link

Add ARM support for kraken2 #1428

Open pinin4fjords opened 1 month ago

pinin4fjords commented 1 month ago

Description of feature

Kraken2 is currently lacking ARM support in Bioconda/ conda-forge, so will not work here: https://anaconda.org/bioconda/kraken2

The fix will be driving for a new kraken2 build in those channels with ARM support.