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nf-core / sarek

Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
https://nf-co.re/sarek
MIT License
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add parabricks modules to Sarek pipeline #1438

Open Furentsu opened 4 months ago

Furentsu commented 4 months ago

8 parabricks modules in total should be added to Sarek:

Documentation for each parabricks tool can be found here: https://docs.nvidia.com/clara/parabricks/4.2.0/documentation/tooldocs/standalonetools.html

kenibrewer commented 4 months ago

This is a super cool idea! Excited for this one!

FriederikeHanssen commented 4 months ago

excited for this one!