Open FriederikeHanssen opened 2 months ago
I get this same error even when not using -resume
and is preventing me from running Sarek.
Not a valid path value: './igenomes/Homo_sapiens/GATK/GRCh38/Annotation/NGSCheckMate/SNP_GRCh38_hg38_wChr.bed'
I have confirmed that the file does in fact exist in the specified location.
Description of the bug
NGSCHeckmate should not even be running
Command used and terminal output
Relevant files
No response
System information
sarek: 3.4.2