nf-core / sarek

Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
https://nf-co.re/sarek
MIT License
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transfer variant calling tutorial on nf-core/sarek repo #1696

Closed lescai closed 3 weeks ago

lescai commented 3 weeks ago

This issue is to track the work needed to add the tutorial on Sarek variant calling under /usage on Sarek repo during the hackathon October 2024

For documentation: the material in .md files should be added under /docs by creating a /usage folder in https://github.com/nf-core/sarek/tree/dev/docs each .md page under /usage will be linked on the left hand side on the rendered nf-core website

see here: https://github.com/nf-core/crisprseq/tree/master/docs/usage rendered here: https://nf-co.re/crisprseq/2.2.1/docs/usage/