nf-core / sarek

Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
https://nf-co.re/sarek
MIT License
410 stars 417 forks source link

Parabricks fq2bam and applybqsr #1705

Closed famosab closed 3 weeks ago

famosab commented 3 weeks ago

PR checklist

famosab commented 3 weeks ago

We also created the subworkflow in the modules repository - check https://github.com/nf-core/modules/pull/6876