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nf-core / seqinspector

QC pipeline to inspect your sequences
https://nf-co.re/seqinspector
MIT License
5 stars 21 forks source link

enable selection of tools #32

Open FranBonath opened 1 week ago

FranBonath commented 1 week ago

Check out with e.g. Sarek how to make tools optional, have a lean and extensive mode

MatthiasZepper commented 1 week ago

Proof of concept by Mahesh

mahesh-panchal commented 1 week ago

https://github.com/NBISweden/Earth-Biogenome-Project-pilot/blob/5a7d7c39423de7926c7b1be1447593cbed1059b0/configs/modules.config#L128

Shows how settings can be taken from the meta map and used with ext.args