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nf-core / smrnaseq

A small-RNA sequencing analysis pipeline
https://nf-co.re/smrnaseq
MIT License
74 stars 125 forks source link

Assess converting local modules to nf-core #392

Closed nschcolnicov closed 2 months ago

nschcolnicov commented 2 months ago

The scope of this ticket is to assess: Which modules could already be replaced by nf-core ones, with or without minimal changes to config or workflow files. Which modules could be updated to become an nf-core module.

And on a second step, to implement these changes.

FYI @atrigila @apeltzer @grst

apeltzer commented 2 months ago

Makes sense - please do not overinvest. If there are easy ones - yes go ahead, if there are debatable ones --> assess nd keep for now, some might be difficult / overinvestment and in such cases we should keep them local only 👍🏻