Closed grst closed 1 year ago
Adds FastQC and a basic MultiQC report.
Additional MultiQC modules, such as spaceranger or checkatlas, can be added in follow-up PRs as discussed in #40.
Since we now have MultiQC back in, I could also get rid of the custom diff for dumpsoftwareversions.
nf-core lint
nextflow run . -profile test,docker --outdir <OUTDIR>
docs/usage.md
docs/output.md
CHANGELOG.md
README.md
Posted for pipeline commit 08fda75
+| ✅ 154 tests passed |+ #| ❔ 2 tests were ignored |# !| ❗ 9 tests had warnings |!
Adds FastQC and a basic MultiQC report.
Additional MultiQC modules, such as spaceranger or checkatlas, can be added in follow-up PRs as discussed in #40.
Since we now have MultiQC back in, I could also get rid of the custom diff for dumpsoftwareversions.
PR checklist
nf-core lint
).nextflow run . -profile test,docker --outdir <OUTDIR>
).docs/usage.md
is updated.docs/output.md
is updated.CHANGELOG.md
is updated.README.md
is updated (including new tool citations and authors/contributors).