Closed sofstam closed 1 year ago
nf-core lint
overall result: Passed :white_check_mark: :warning:Posted for pipeline commit b85d397
+| ✅ 157 tests passed |+
!| ❗ 1 tests had warnings |!
We already have support for:
taxpasta_add_name = false
taxpasta_add_rank = false
taxpasta_add_lineage = false
taxpasta_add_idlineage = false
Or do you mean something different?
Sorry new flag (singular)
https://taxpasta.readthedocs.io/en/latest/quick_reference/standardise/
--add-rank-lineage
as added in https://github.com/taxprofiler/taxpasta/pull/130
This PR updates taxpasta module to 0.5.0
PR checklist
nf-core lint
).nextflow run . -profile test,docker --outdir <OUTDIR>
).docs/usage.md
is updated.docs/output.md
is updated.CHANGELOG.md
is updated.README.md
is updated (including new tool citations and authors/contributors).