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nf-core / taxprofiler

Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data
https://nf-co.re/taxprofiler
MIT License
128 stars 34 forks source link

KMCP profile mode forced for all databases #358

Closed jfy133 closed 4 months ago

jfy133 commented 1 year ago

Description of the bug

we really want them to do via the database sheet on a per database basis

poss. solution: parse the db string for the -m, put that in a separate channel in the multiMap

Command used and terminal output

No response

Relevant files

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System information

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jfy133 commented 4 months ago

Fixed in https://github.com/nf-core/taxprofiler/pull/493