search

nf-core / taxprofiler

Highly parallelised multi-taxonomic profiling of shotgun short- and long-read metagenomic data
https://nf-co.re/taxprofiler
MIT License
128 stars 36 forks source link

New feature: melon - long reads profiler #517

Open LilyAnderssonLee opened 2 months ago

LilyAnderssonLee commented 2 months ago

Description of feature

Add melon as a long-reads classifier.

Melon: metagenomic long-read-based taxonomic identification and quantification using marker genes.

There is a benchmarking poster about melon: https://a.storyblok.com/f/196663/x/3cff79e4ec/microbeconference_20240502-1333.pdf