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nf-core / test-datasets

Test data to be used for automated testing with the nf-core pipelines
https://nf-co.re
MIT License
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update nextclade datasets #1378

Closed Joon-Klaps closed 2 weeks ago

Joon-Klaps commented 2 weeks ago

Add nextclade test datasets to be compatible with v3+ of nextclade

Joon-Klaps commented 2 weeks ago

Please forgive my editor config reformatting the md file.

Joon-Klaps commented 2 weeks ago

Linked to https://github.com/nf-core/viralrecon/pull/446

robsyme commented 2 weeks ago

The current version of viralrecon uses nextclade v2.12.0, which is incompatible with these v3 style references. If we update these configuration, won't this break the current viralrecon release?